YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57164359, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKWLVLLGLV AFSECIVKMP LRRVKTMRKN PSGKNMMNNF LKEHAYRLSQ ISFRGLNLTH  60
   61 PLSNYIDMLY TGNITIGTPP QKFQVIFDTG SSDLWVPSNF CTSPACSTQA RFRYRQSSTF 120
  121 RLTNRTFCIT YGSGGLKGIV AHDTVRIGNL VSTDQPFGLT LKEYGFENIP FDGVLGLNYP 180
  181 NISFSGAVPI FDKLKNEGAI LEPVFAFYFS KDEQEGSVVM FGGVDHRYYE GELNWVPLTK 240
  241 AGDWIVRLDR ISIGRKVIAC SGDCEAVVDT GTAFIGGPRK LVKKIQKLIG ARRRGNKDDA 300
  301 GRCSTTFQEN RVRLSTESWL LGNVFLRVYL SVFDRGNDRI GLAPAV

Type	Start	End	Confidence
Signal Peptide	1	15	0.95
N-region	1	6
H-region	7	12
C-region	13	15
Cleavage Site	15	16
Non-Cytoplasmic	16	346	0.99