YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|9055396
Protein type:	Globular with Signal Peptide
Type Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTLVTGGAG FIGSHFVRSL LADGTGQEAV TVLDALTYAG NLANLRSVQG DPRLRFVQGD  60
   61 ILDSARVAEL VAGHDAVVNL AAESHVDRSI ANGAKFSSTN VLGTQTLLEA AVQAGGVTVV 120
  121 HVSTDEVYGS IPIGSWTEEE PLAPNSPYAA AKAGSDLLAL AYHRTHGLDV RITRCSNNYG 180
  181 PYQFPEKIIP LFITRLLQGR KVPLYGDGSQ IRDWLHVVDH CRAIRLVLEG GRAGEIYNVG 240
  241 GGTELTNKHL TDRLLDACGA DWDSVEHVAD RKGHDQRYSV DWSKIRDELG YEPRHTFDEG 300
  301 LASTVSWYRQ NRDWWRR

Type	Start	End	Confidence
Signal Peptide	1	19	0.68
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	317	0.99