YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|9963897
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADRDRDRLH PHQIQVHPQH PGQQRYEGGA KSLLPQKGPS TGQILAIITL LPIGGTLLCL  60
   61 AGITLAGSLI GLAFATPLFV IFSPVLVPAA FLLALAVTAF LTSGAFGLTG LSSLSWVFNS 120
  121 FRQATGQEPL DYAKRRMQEG TMYVGEKTKQ VGETIKSKAQ EGGHDDRTTV LGGRT

Type	Start	End	Confidence
Cytoplasmic	1	43	0.86
Transmembrane Helix	44	75	0.77
Non-Cytoplasmic	76	85	0.54
Transmembrane Helix	86	112	0.81
Cytoplasmic	113	175	0.80