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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|10798847
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVADVDFDEK VAVRPAVLSG FTLAAVPEAL PVAEPGRDGD GHVAGAADAP AAATLGTVFT  60
   61 VGLALAAAGA TGRRLLNAAE RRLLDGRLLA GAVTLGTGVH VSIGGVTLAV TFGTDLAATN 120
  121 RHIALDAVVR VFEVDGDALG DVAALLRAAT SLTATAVEEV VKDVFEAATA HPAEGVSAAS 180
  181 EGIALTAATA AATGPALLGL LEAFVAKLVV HLALFVIRED LLGLLNLLEL LFGVLFVGHV 240
  241 RVVFRGLLAV RVLDLVFRGV PRDPEHVVEV LAHQLLWCNR RRYLKSTSPV SASTGGVRAA 300
  301 STVSFDRPHG SPESRGEIVR LLVVVFVVEV RVGVDEVFRV GIGTRAIGTA GTTSTAGSTS 360
  361 LCLCLLLVHA LANLLQFLRE VFGHVFEFVR TRIVVFEDRF HVLDSRFDVG AEFVVDVLFV 420
  421 LFEEGLSALN CALGLVSGFD GATAFLVLFG VLFGLALHAV DFVVGETSAA FNGDGLGVSG 480
  481 AFVLGGDVDD TVFVDVEADF NLRRSGRCRR DAREREFAEE FVVFSHLAFT LEDADLHRRL 540
  541 VVGRGGENLR LLGRDGRVLL DEALEETTLD LDTERQRRHV EEDDVVDLAA EDATLNGRAE 600
  601 CDGLVGVDGL LGLGSENLFD LVEDLRHAGR ATDEDDVVDV VLAVSGVFEG LLGRFDGAVD 660
  661 EVLRERLELR AGQVVFEVDR TGVRRRDEGE VDGRLLARGE FDLGFFGRVL QALEGLSVLA 720
  721 EVDAVVVLEL RGEPVDDCFV PVVTAEFVVP VRRDNFVDAA AEVEDGNVES TATKVVDENR 780
  781 LVRLVVETVG HRRCGRFVDD TLDFETCDFA GVFRRLTLFV VEVRRDGDDR LFDLVAEVVF 840
  841 GVALDFLENH RRNLLRRVLL ALDIDSVPVV AHVALDGADG VLRVLDSLVL RRLAHQTLTI 900
  901 VGERDDGRSR SVAFCVHNNL RVAALHYRER AVRGTEVDTQ NLVARHLARK YRLLPVKGY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle