YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|6573730
Protein type:	Transmembrane
Type Confidence:	0.67
Topology Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQITLSLYFL FKSYQKSHNV FISLQVINKT PQKVKKMAAI TSATVTIPSF TGLKLAVSSK  60
   61 PKTLSTISRS TSATRAPPKL ALKSSLKDFG VIAVATAASI VLAGNAMAME VLLGSDDGSL 120
  121 AFVPSEFTVA KGEKIVFKNN AGFPHNVVFD EDEIPSGVDA SKISMDETAL LNGAGETYEV 180
  181 TLTEPGSYGF YCAPHQGAGM VGKLTVK

Type	Start	End	Confidence
Cytoplasmic	1	88	0.59
Transmembrane Helix	89	109	0.59
Non-Cytoplasmic	110	207	0.92