YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|6692107
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGVDNTNPM LTLEEGENNN PFSSLDDKTL MMMAPSLIFS GDVGPSSSSC TPAGYHLSAQ  60
   61 LENFRGGGGE MGGLVSNNSN NSDHNKNCNK GKGKRTLAMQ RIAFHTRSDD DVLDDGYRWR 120
  121 KYGQKSVKNN AHPRSYYRCT YHTCNVKKQV QRLAKDPNVV VTTYEGVHNH PCEKLMETLS 180
  181 PLLRQLQFLS RDAQKHKWSD KPFLVPFSHT NLVLKVKFQL SGISDAGEFI YLPSTFLNSF 240
  241 YIKYYDPKRN NFITVEFKGV TDCEFRHNIM VLETVVLMPS RLSQITWTIS SLIVTLETVF 300
  301 FFFFSLSLCN FMIIISLFLN CKLSKYVYHS LI

Type	Start	End	Confidence
Non-Cytoplasmic	1	298	0.81
Transmembrane Helix	299	319	0.88
Cytoplasmic	320	332	0.79