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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|463250
Protein type: Globular with Signal Peptide
Type Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFGSADALL GAPFAPLHGG GSLHYSLSRK AGPGGTRSAA GSSSGFHSWA RTSVSSVSAS  60
   61 PSRFRGAASS TDSLDTLSNG PEGCVVAAVA ARSEKEQLQA LNDRFAGYID KVRQLEAHNR 120
  121 SLEGEAAALR QQQAGRAAMG ELYEREVREM RGAVLRLGAA RGQLRLEQEH LLEDIAHVRQ 180
  181 RLDEEARQRE EAEAAARALA RFAQEAEAAR VELQKKAQAL QEECGYLRRH HQEEVGELLG 240
  241 QIQGCGAAQA QAQAEARDAL KCDVTSALRE IRAQLEGHAV QSTLQSEEWF RVRLDRLSEA 300
  301 AKVNTDAMRS AQEEITEYRR QLQARTTELE ALKSTKESLE RQRSELEDRH QADIASYQDA 360
  361 IQQLDSELRN TKWEMAAQLR EYQDLLNVKM ALDIEIAAYR KLLEGEECRI GFGPSPFSLT 420
  421 EGLPKIPSIS THIKVKSEEM IKVVEKSEKE TVIVEGQTEE IRVTEGVTEE EDKEAQGQEG 480
  481 EEAEEGEEKE EEEGAAATSP PAEEAASPEK ETKSRVKEEA KSPGEAKSPG EAKSPGEAKS 540
  541 PAEAKSPGEA KSPREAKSPG EAKSPAEPKS PAEPKSPAEA KSPAEPKSPA TVKSPGEAKS 600
  601 PSEAKSPAEA KSPAEAKSPA EAKSPAEAKS PAEAKSPAEA KSPATVKSPG EAKSPSEAKS 660
  661 PAEAKSPAEA KSPAEAKSPA EVKSPGEAKS PAEPKSPAEA KSPAAVKSPA EAKSPAAVKS 720
  721 PGEAKSPGEA KSPAEAKSPA EAKSPIEVKS PEKAKTPVKE GAKSPAEAKS PEKAKSPVKE 780
  781 DIKPPAEAKS PEKAKSPMKE GAKPPEKAKP LDVKSPEAQT PVQEEANDPT DIRPPEQVKS 840
  841 PAKEKAKSPE KEEAKTSEKV APKKEEVKSP VKEEVKAKEP PKKVEEEKTL PTPKTEAKES 900
  901 KKDEAPKEAP KPKVEEKKET PTEKPKDSTA EAKKEEAGEK KKAVASEEET PAKLGVKEEA 960
  961 KPKEKTETTK TEAEDTKAKE PSKPTETEKP KKEEMPAAPE KKDTKEEKTT ESRKPEEKPK1020
 1021 MEAKVKEDDK SLSKEPSKPK TEKAEKSSST DQKESQPPEK TTEDKATKGE K

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle