YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GATL3_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSLRLRLCL LLLLPITISC VTVTLTDLPA FREAPAFRNG RECSKTTWIP SDHEHNPSII  60
   61 HIAMTLDAIY LRGSVAGVFS VLQHASCPEN IVFHFIATHR RSADLRRIIS STFPYLTYHI 120
  121 YHFDPNLVRS KISSSIRRAL DQPLNYARIY LADLLPIAVR RVIYFDSDLV VVDDVAKLWR 180
  181 IDLRRHVVGA PEYCHANFTN YFTSRFWSSQ GYKSALKDRK PCYFNTGVMV IDLGKWRERR 240
  241 VTVKLETWMR IQKRHRIYEL GSLPPFLLVF AGDVEPVEHR WNQHGLGGDN LEGLCRNLHP 300
  301 GPVSLLHWSG KGKPWLRLDS RRPCPLDSLW APYDLFRYSP LISDS

Type	Start	End	Confidence
Signal Peptide	1	26	0.92
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	345	0.99