YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|15217788, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKSSPLLCF SLALFSLLSS PSSSTRIISS IVPSAAPSPA VAPTTDGDVD ENDFSAFTQW  60
   61 NILNLTDLKS TFKNLPDFSK LNISSLHVSP AVGSVCSNTD YAAECIVSIL PLLRDFRKFE 120
  121 PKPIDVLRME MSALYEKANA TLDLAKRLIV DKSTPRDVAD VLDLCVDNYE SLLDDLKDAS 180
  181 VAVDDGDFER LESVVSAAIA DVVTCSDAFA ESSELESPMA NVDDFLKKLC SNVLAISQMI 240
  241 HM

Type	Start	End	Confidence
Signal Peptide	1	24	0.99
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	242	0.99