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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PME18_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNSNQPLLS KPKSLKHKNL CLVLSFVAIL GSVAFFTAQL ISVNTNNNDD SLLTTSQICH  60
   61 GAHDQDSCQA LLSEFTTLSL SKLNRLDLLH VFLKNSVWRL ESTMTMVSEA RIRSNGVRDK 120
  121 AGFADCEEMM DVSKDRMMSS MEELRGGNYN LESYSNVHTW LSSVLTNYMT CLESISDVSV 180
  181 NSKQIVKPQL EDLVSRARVA LAIFVSVLPA RDDLKMIISN RFPSWLTALD RKLLESSPKT 240
  241 LKVTANVVVA KDGTGKFKTV NEAVAAAPEN SNTRYVIYVK KGVYKETIDI GKKKKNLMLV 300
  301 GDGKDATIIT GSLNVIDGST TFRSATVAAN GDGFMAQDIW FQNTAGPAKH QAVALRVSAD 360
  361 QTVINRCRID AYQDTLYTHT LRQFYRDSYI TGTVDFIFGN SAVVFQNCDI VARNPGAGQK 420
  421 NMLTAQGRED QNQNTAISIQ KCKITASSDL APVKGSVKTF LGRPWKLYSR TVIMQSFIDN 480
  481 HIDPAGWFPW DGEFALSTLY YGEYANTGPG ADTSKRVNWK GFKVIKDSKE AEQFTVAKLI 540
  541 QGGLWLKPTG VTFQEWL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle