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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|30679448
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.44
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWISRLKRVR RTIMVLGVAN FVVIVSGCVL TLVSDADCDS PGQLFPLFAV CFAAGVKLAA  60
   61 MVKVGTTQEL MAMTIMDSPT QNNHQRKLKY KTWLWWTRFA MVITVLQFIG ATYLLFRLAK 120
  121 YVSRDGLPRN CVLGLSPDTG GWKQTLQVTF LITVCFVALA QCFTGSDILQ WRGVIEEDEV 180
  181 CSVARLLGDL VSYRASGTGH LEFLAGLALL QSNSQFPESY EDCMEAPAFH LQEAAMLHKF 240
  241 AEAAYTGPLL DVGRNPALFL CTWICRQGIL TPWSRKWRPK LDGDNWWRGH AAAFLKFINF 300
  301 PAHVLRRGRI CREKCKATYF VVVLHYLRCV VIAVRGTETA EDLITDGLGR ACSLTVEDLD 360
  361 GLTNHVHGMD TSRKHYGHSG IVEAARDLFM QIEGDPKSGE SESSGFLSSL IGDGCECDGY 420
  421 SIRIVGHSLG GAIASLLGIR LRCRFPNLYV YAYGPLPCVD SDVAEACSEF VTSIVLDNEF 480
  481 SSRLSYGSIR RLQVAAIKVL SQDPKADTAL IFRLARRFLS ASKRQRENVE EKTSEEAIDV 540
  541 NNSPESQHDQ IYPIWEEAEA EMQQDSEEFI NPFHGMASED NPVSQFMETG PTKEDDDEAP 600
  601 EMFMPGLVIH IVPEGNNMSV PIWRGWPICD VTDGYKAYVA NRESFKEIMV SPSMFLDHLP 660
  661 WRCRHALQKV LESRNLFFDL TSETDIV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle