YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PME56_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMTSTMQLL VLSFLVIASL FLGATVAPPA SLISTPDQAL KDKADLIVAK DGSGNFTTVN  60
   61 EAVAAAPENG VKPFVIYIKE GLYKEVIRIG KKKTNLTLVG DGRDLTVLSG DLNGVDGIKT 120
  121 FDSATLAVDE SGFMAQDLCI RNTAGPEKRQ AVALRISTDM TIIYRCRIDA YQDTLYAYSG 180
  181 RQFYRDCYIT GTVDFIFGRA AAVFQYCQIE ARKPGIGQTN ILTAQSREED TATSGFSFQK 240
  241 CNISASSDLT PIKGTVKTFL GRPWRAFSRV VFMESFIDDV IDRAGWTP

Type	Start	End	Confidence
Signal Peptide	1	32	0.90
N-region	1	23
H-region	24	29
C-region	30	32
Cleavage Site	32	33
Non-Cytoplasmic	33	288	0.99