YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|222423834, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWRYICLPFF LLLWNDIGLA KEASESILLP SESGFDGSRS PVCSSPDPNL NYRPVIGILS  60
   61 HPGDGASGRL TNDTSSTYIA ASYVKFAEAG GARVIPLIYN EPEEVLFQKL ELVNGVIFTG 120
  121 GWAKKYDYFE IVKKIFTKAL ERNDAGEHFP VYGICLGFEL MSIIISQNRD ILERFDAEDN 180
  181 ASSLQFVDNV NNDGTLFQRF PPELLKKLST DCLVMQKHKY GITPANFQAN PALSSFFEIL 240
  241 TTCIDENSKT YVSTVKAKRY PITGFQWHPE KNAFEWGSSA IPHSEDAIQV TQHAASYLVS 300
  301 EARKSLNRPE SQKVLSNLIY NYKPTYCGYA GRGYDEVYIF TQPRSRF

Type	Start	End	Confidence
Signal Peptide	1	20	0.92
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	347	0.99