YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|42572157, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQTSYYRSP FGDTTYTKVF VGGLAWETPT DEMRRYFEQF GEILEAVIIT DKNTGKSKGY  60
   61 GFVTFRESDS ATRAVADPNP VIDGRKANCN IASFGRPRPS PPRGRGQTGS PSQYQSGGPS 120
  121 TYTGMAAPLP PAAAPQLMYP SYGYTYNPDQ FGYHQALYNT QLQQAQYYQQ QQQLYGGGAT 180
  181 SPSSSGATIM PSPYYYGYSL QAPRVPYQHH HHLPQPYNPQ QHHHQRFSSP SFLVYPSNSS 240
  241 FAPPLQGVLS SSTGTYLINS FFFFIFLWIY F

Type	Start	End	Confidence
Non-Cytoplasmic	1	246	0.70
Transmembrane Helix	247	270	0.84
Cytoplasmic	271	271	0.67