YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	EXL4_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCSKITLVLT LFSSYFISTD AVNGSFPALL AFGDSILDTG NNNFLLTFMK GNIWPYGRSF  60
   61 SMRRATGRFG NGRVFSDIVA EGLGIKKILP AYRKLFNSPS DLRTGVCFAS GGAGVDPVTS 120
  121 KLLRVLTPKD QVNDFKGYIR KLKATAGPSR ASSIVSNAVI LVSQGNNDIG ISYFGTPTAA 180
  181 FRGLTPNRYT TKLAGWNKQF MKELYDQGAR KFAVMGVIPL GCLPMTRIFL GGFVITCNFF 240
  241 ANRVAEQYNG KLRSGTKSWG REAGFRGAKF VYVDMYNTLM DVIKNYRRYG FSNEKNGCCC 300
  301 MITAIIPCPN PDKYVFYDFV HPSEKAYRTI SKKLVQDIKN GLA

Type	Start	End	Confidence
Signal Peptide	1	21	0.95
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	343	0.96