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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: QKY_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.35
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNTTPFHSDP PPSRIQRKLV VEVVEARNIL PKDGQGSSSA YVVVDFDAQK KRTSTKFRDL  60
   61 NPIWNEMLDF AVSDPKNMDY DELDIEVYND KRFGNGGGRK NHFLGRVKIY GSQFSRRGEE 120
  121 GLVYFPLEKK SVFSWIRGEI GLKIYYYDEA ADEDTAGGGG GQQQQQQQQQ FHPPQQEADE 180
  181 QQHQQQFHPP PQQMMNIPPE KPNVVVVEEG RVFESAQSQR YTETHQQPPV VIVEESPPQH 240
  241 VMQGPNDNHP HRNDNHPQRP PSPPPPPSAG EVHYYPPEVR KMQVGRPPGG DRIRVTKRPP 300
  301 NGDYSPRVIN SKTGGGETTM EKKTHHPYNL VEPMQYLFVR IVKARGLPPN ESAYVKVRTS 360
  361 NHFVRSKPAV NRPGESVDSP EWNQVFALGH NRSDSAVTGA TLEISAWDAS SESFLGGVCF 420
  421 DLSEVPVRDP PDSPLAPQWY RLEGSGADQN SGRISGDIQL SVWIGTQVDE AFPEAWSSDA 480
  481 PHVAHTRSKV YQSPKLWYLR VTVLEAQDLH IAPNLPPLTA PEIRVKAQLG FQSARTRRGS 540
  541 MNNHSGSFHW HEDMIFVAGE PLEDCLVLMV EDRTTKEATL LGHAMIPVSS IEQRIDERFV 600
  601 PSKWHTLEGE GGGGGGGGGP GGGGGGGPYC GRISLRLCLE GGYHVLEEAA HVCSDFRPTA 660
  661 KQLWKPPIGI LELGILGARG LLPMKAKNGG KGSTDAYCVA KYGKKWVRTR TITDSFDPRW 720
  721 HEQYTWQVYD PCTVLTVGVF DNWRMFSDAS DDRPDTRIGK IRIRVSTLES NKVYTNSYPL 780
  781 LVLLPSGMKK MGEIEVAVRF ACPSLLPDVC AAYGQPLLPR MHYIRPLGVA QQDALRGAAT 840
  841 KMVAAWLARA EPPLGPEVVR YMLDADSHAW SMRKSKANWY RIVGVLAWAV GLAKWLDNIR 900
  901 RWRNPVTTVL VHILYLVLVW YPDLVVPTAF LYVVMIGVWY YRFRPKIPAG MDIRLSQAET 960
  961 VDPDELDEEF DTIPSSRRPE VIRARYDRLR ILAVRVQTIL GDFAAQGERI QALVSWRDPR1020
 1021 ATKLFIAICL VITIVLYAVP AKMVAVALGF YYLRHPMFRD TMPTASLNFF RRLPSLSDRL1080
 1081 I

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