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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CER1_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATKPGVLTD WPWTPLGSFK YIVIAPWAVH STYRFVTDDP EKRDLGYFLV FPFLLFRILH  60
   61 NQVWISLSRY YTSSGKRRIV DKGIDFNQVD RETNWDDQIL FNGVLFYIGI NLLPEAKQLP 120
  121 WWRTDGVLMA ALIHTGPVEF LYYWLHKALH HHFLYSRYHS HHHSSIVTEP ITSVIHPFAE 180
  181 HIAYFILFAI PLLTTLLTKT ASIISFAGYI IYIDFMNNMG HCNFELIPKR LFHLFPPLKF 240
  241 LCYTPSYHSL HHTQFRTNYS LFMPLYDYIY GTMDESTDTL YEKTLERGDD IVDVVHLTHL 300
  301 TTPESIYHLR IGLASFASYP FAYRWFMRLL WPFTSLSMIF TLFYARLFVA ERNSFNKLNL 360
  361 QSWVIPRYNL QYLLKWRKEA INNMIEKAIL EADKKGVKVL SLGLMNQGEE LNRNGEVYIH 420
  421 NHPDMKVRLV DGSRLAAAVV INSVPKATTS VVMTGNLTKV AYTIASALCQ RGVQVSTLRL 480
  481 DEYEKIRSCV PQECRDHLVY LTSEALSSNK VWLVGEGTTR EEQEKATKGT LFIPFSQFPL 540
  541 KQLRRDCIYH TTPALIVPKS LVNVHSCENW LPRKAMSATR VAGILHALEG WEMHECGTSL 600
  601 LLSDLDQVWE ACLSHGFQPL LLPHH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle