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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|30681482
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.97
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPSLRNFNF FHRFSTFLVF SLFSVVSSDD LQVLLKLKSS FADSNLAVFD SWKLNSGIGP  60
   61 CSFIGVTCNS RGNVTEIDLS RRGLSGNFPF DSVCEIQSLE KLSLGFNSLS GIIPSDLKNC 120
  121 TSLKYLDLGN NLFSGAFPEF SSLNQLQFLY LNNSAFSGVF PWKSLRNATS LVVLSLGDNP 180
  181 FDATADFPVE VVSLKKLSWL YLSNCSIAGK IPPAIGDLTE LRNLEISDSG LTGEIPSEIS 240
  241 KLTNLWQLEL YNNSLTGKLP TGFGNLKNLT YLDASTNLLQ GDLSELRSLT NLVSLQMFEN 300
  301 EFSGEIPLEF GEFKDLVNLS LYTNKLTGSL PQGLGSLADF DFIDASENLL TGPIPPDMCK 360
  361 NGKMKALLLL QNNLTGSIPE SYANCLTLQR FRVSENNLNG TVPAGLWGLP KLEIIDIEMN 420
  421 NFEGPITADI KNGKMLGALY LGFNKLSDEL PEEIGDTESL TKVELNNNRF TGKIPSSIGK 480
  481 LKGLSSLKMQ SNGFSGEIPD SIGSCSMLSD VNMAQNSISG EIPHTLGSLP TLNALNLSDN 540
  541 KLSGRIPESL SSLRLSLLDL SNNRLSGRIP LSLSSYNGSF NGNPGLCSTT IKSFNRCINP 600
  601 SRSHGDTRVF VLCIVFGLLI LLASLVFFLY LKKTEKKEGR SLKHESWSIK SFRKMSFTED 660
  661 DIIDSIKEEN LIGRGGCGDV YRVVLGDGKE VAVKHIRCSS TQKNFSSAMP ILTEREGRSK 720
  721 EFETEVQTLS SIRHLNVVKL YCSITSDDSS LLVYEYLPNG SLWDMLHSCK KSNLGWETRY 780
  781 DIALGAAKGL EYLHHGYERP VIHRDVKSSN ILLDEFLKPR IADFGLAKIL QASNGGPEST 840
  841 HVVAGTYGYI APAEYGYASK VTEKCDVYSF GVVLMELVTG KKPIEAEFGE SKDIVNWVSN 900
  901 NLKSKESVME IVDKKIGEMY REDAVKMLRI AIICTARLPG LRPTMRSVVQ MIEDAEPCRL 960
  961 MGIVISKESD VKVKEIS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle