YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|18408748, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRCMRGARRL RRCGHCLFVL MDSGHLSVTM LSFVGILRSV RLLVEGILMM IFSRTTTLLL  60
   61 LPLPHLQTNQ TMKEDVLCCL DGCMFVFKLF FSEFVRFCFY LFLRCLGAWY KTQIITSNLF 120
  121 TNEKEIMLIG S

Type	Start	End	Confidence
Cytoplasmic	1	13	0.94
Transmembrane Helix	14	37	0.86
Non-Cytoplasmic	38	42	0.79
Transmembrane Helix	43	63	0.70
Cytoplasmic	64	131	0.55