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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|12583596
Protein type: Transmembrane
Type Confidence: 0.82
Topology Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLVPSPQPG RDMESNGPSQ PRDEEPQTPG SATKVPLAEY RLCNGSDKEC TSPTTRVSKK  60
   61 DALKAQKENY RQEKKRATKQ LFSALTDPSV VIMADSLKIR GTLKSWTKLW CVLKPGVLLI 120
  121 YKTPKVGQWV GTVLLHCCEL IERPSKKDGF CFKLFHPLDQ SVWAVKGPKG ESVGSITQPL 180
  181 PSSYLIFRAA SESDGRCWLD ALELALRCSS LLRLSTCKQG RDGEQGSSPD ASPSSLYGLP 240
  241 TSATIPDQDL FPLNGSALEN DAFSDKSERE NAEDSDAETQ DHSRKTNESG SDLLDSPGGP 300
  301 WRGTTYVEQV QEELGELDET SQVETVSEEN KSLMWVLLRQ LRPGMDLSRV VLPTFVLEPR 360
  361 SFLGKLSDYY YHGDLLSRAA AEDDPYCRMK LVLRWYLSGF YKKPKGIKKP YNPILGETFR 420
  421 CRWLHPQTNS HTFYIAEQVS HHPPVSAFYV SNRKDGFCMS GSITAKSKFY GNSLSALLDG 480
  481 KAKLTFLNRK EEYTLTMPYA HCRGILYGTM TMELGGKVNI ECEKNNLQAE LDFKLKPFFG 540
  541 SSANINQISG KIMSGEEVLA RLTGHWDRDV FIKEESSGGT ELFWTPSEEV RRQRLKRHTV 600
  601 LLEEQSELES ERLWQHVTRA IREGDQHKAT QEKSVLEEAQ RQRAREHQQS LTPWKPQLFL 660
  661 LDPLTQEWRY RYEDLSPWDP LKDIAQYEQD GILHTLQRET MSGQTTFLGS PDSRHKRPSS 720
  721 DRRLRKASDQ PSGHSQVTES SGSTPESCPD LSDEDFVPGG ESPCPRCRRE VHRLKMLQEA 780
  781 VLSIQEAQQE LHRHLSTMLS STVRAGQAPA PSLLQNPRSW FLLCIFLTCQ LFINYILK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle