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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ALA6_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARRRIRSRI RKSHFYTFRC LRPKTLDDQG PHVINGPGYT RIVHCNQPHL HLATKLIRYR  60
   61 SNYVSTTRYN LLTFLPKCLY EQFHRVANFY FLVAAILSVF PLSPFNKWSM IAPLVFVVGL 120
  121 SMGKEALEDW RRFMQDVEVN SRKASVHKGS GDFGRRTWKR IRVGDIVRVE KDEFFPADLL 180
  181 LLSSSYEDGI CYVETMNLDG ETNLKVKRCL DATLALEKDE SFQNFSGTIK CEDPNPNLYT 240
  241 FVGNLECDGQ VYPLDPNQIL LRDSKLRNTA YVYGVVVFTG HDTKVMQNST KSPSKRSRIE 300
  301 KRMDYIIYTL FALLLTVSFI SSLGFAVMTK LLMAEWWYLR PDKPESLTNP TNPLYAWVVH 360
  361 LITALLLYGY LIPISLYVSI EVVKVLQAHF INQDLQLYDS ESGTPAQART SNLNEELGQV 420
  421 DTILSDKTGT LTCNQMDFLK CSIAGTSYGV RASEVELAAA KQMAMDLEEK GEEVANLSMN 480
  481 KGRTQRYAKL ASKTSSDFEL ETVVTASDEK DQKQNTGVKG FSFEDNRLMN ENWLNEPNSD 540
  541 DILMFFRILA VCHTAIPEVD EDTGMCTYEA ESPDEVAFLV ASREFGFEFT KRTQSSVFIA 600
  601 ERFSSSGQPV DREYKILNLL DFTSKRKRMS AIVRDEEGQI LLLCKGADSI IFERLSKSGK 660
  661 EYLGATSKHL NVYGEAGLRT LALGYRKLDE TEYAAWNSEF HKAKTSVGAD RDEMLEKVSD 720
  721 MMEKELILVG ATAVEDKLQK GVPQCIDNLA QAGLKIWVLT GDKMETAINI GYACSLLRQG 780
  781 MKQISISLTN VEESSQNSEA AAKESILMQI TNASQMIKIE KDPHAAFALI IDGKTLTYAL 840
  841 KDDVKYQFLA LAVDCASVIC CRVSPKQKAL VTRLAKEGTG KTTLAIGDGA NDVGMIQEAD 900
  901 IGVGISGVEG MQAVMASDFS IAQFRFLERL LVVHGHWCYK RIAQMICYFF YKNITFGLTL 960
  961 FYFECFTGFS GQSIYNDSYL LLFNVVLTSL PVISLGVFEQ DVPSDVCLQF PALYQQGPKN1020
 1021 LFFDWYRILG WMGNGVYASI VIFTLNLGIF HVQSFRSDGQ TADMNAMGTA MFTCIIWAVN1080
 1081 VQIALTMSHF TWIQHVMIWG SIGAWYVFLA LYGMLPVKLS GNIFHMLVEI LAPAPIFWLT1140
 1141 SLLVIAATTL PYLFHISYQR SVNPLDHHII QEIKHFRIDV EDERMWKREK SKAREKTKIG1200
 1201 FTARVDAKIR QLRGRLQRKH SVLSVMSGTS SNDTPSSNSQ 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle