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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PDI15_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLIPKPISK VSTFTFILLI LLSFTIIIAY SSPDSNVESN EPGFDSDLDQ LLAVDEQLQE  60
   61 DRPEQQSEAE TVSKAQRIVL ELNGDYTKRV IDGNEFVMVL GYAPWCARSA ELMPRFAEAA 120
  121 TALKEIGSSV LMAKIDGDRY SKIASELEIK GFPTLLLFVN GTSLTYNGGS SAEDIVIWVQ 180
  181 KKTGAPIITL NTVDEAPRFL DKYHTFVLGL FEKFEGSEHN EFVKAAKSDD EIQFIETRDS 240
  241 DVAKLLFPDL KSNNVFIGLV KPEAERYTVY DGSYKMEKIL EFLGSNKFPL FTKLTETNTV 300
  301 WVYSSPVKLQ VMLFSKADDF QKLAQPLEDI ARKFKSKLMF IYVDITNENL AMPFLILFGI 360
  361 EAGNKTVVAA FDNNLNSKYL LESDPSPNSI EEFCSGLAHG TVSRYYRSEP VPDNENASIV 420
  421 TVVGKTFDGL VLNSRENVLL EVHTPWCVNC EALSKQIEKL AKHFKGFENL VFARIDASAN 480
  481 EHTKLQVDDK YPIILLYKSG EKEKPLKLST KLSAKDIAVF INEELLKPKN GSAKDEL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle