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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|15218050
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.90
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERHCVLVAT FLLMLHIVHA QDQIGFISVD CGLAPRESPY NEAKTGLTYT SDDGLVNVGK  60
   61 PGRIAKEFEP LADKPTLTLR YFPEGVRNCY NLNVTSDTNY LIKATFVYGN YDGLNVGPNF 120
  121 DLYFGPNLWT TVCLIKTGIS IPFINVLELR PMKKNMYVTQ GESLNYLFRV YISNSSTRIR 180
  181 FPDDVYDRKW YPYFDNSWTQ VTTTLDVNTS LTYELPQSVM AKAATPIKAN DTLNITWTVE 240
  241 PPTTKFYSYM HFAELQTLRA NDAREFNVTM NGIYTYGPYS PKPLKTETIY DKIPEQCDGG 300
  301 ACLLQVVKTL KSTLPPLLNA IEAFTVIDFP QMETNGDDVD AIKNVQDTYG ISRISWQGDP 360
  361 CVPKLFLWDG LNCNNSDNST SPIITSLDLS SSGLTGSITQ AIQNLTNLQE LDLSDNNLTG 420
  421 EIPDFLGDIK SLLVINLSGN NLSGSVPPSL LQKKGMKLNV EGNPHLLCTA DSCVKKGEDG 480
  481 HKKKSVIVPV VASIASIAVL IGALVLFFIL RKKKSPKVEG PPPSYMQASD GRSPRSSEPA 540
  541 IVTKNRRFTY SQVAIMTNNF QRILGKGGFG MVYHGFVNGT EQVAVKILSH SSSQGYKEFK 600
  601 AEVELLLRVH HKNLVGLVGY CDEGENMALI YEYMANGDLK EHMSGTRNRF TLNWGTRLKI 660
  661 VVESAQGLEY LHNGCKPPMV HRDVKTTNIL LNEHFQAKLA DFGLSRSFPI EGETHVSTVV 720
  721 AGTPGYLDPE YYKTNWLTEK SDVYSFGIVL LELITNRPVI DKSREKPHIA EWVGVMLTKG 780
  781 DINSIMDPNL NEDYDSGSVW KAVELAMSCL NPSSARRPTM SQVVIELNEC IASENSRGGA 840
  841 SRDMDSKSSI EVSLTFDTEL SPTAR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle