YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|30680757
Protein type:	Globular with Signal Peptide
Type Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSHQAGRKL PLLQLLGCVA VFSVFVFTIQ SSFFADNNRK LDLQPEDIQI LSDFQSSVQQ  60
   61 CVANRGLGLS AHIIDHCNLI LKFPEGTNST WYNAQFKVFE ALEFKYNVCE AVLLWEQYRN 120
  121 MTTVLTREYL DVRPDGWLDY AAMRIAQLGA DKCYNRTLCE EHLNVILPAK PPFHPRQFHK 180
  181 CAVVGNSGDL LKTEFGEEID SHDAVFRDNE APVNEKYAKY VGVKRDFRLV VRGAARNMIK 240
  241 ILNGSDNEVL IIKSVTHRDF NEMIKRIPNP VYLFQGIVLR RGAKGTGMKS IELALSMCDI 300
  301 VDIYGFTVDP GYTEWTRYFS TPRKGHNPLQ GRAYYQLLEC LGVQITC

Type	Start	End	Confidence
Signal Peptide	1	31	0.65
N-region	1	22
H-region	23	28
C-region	29	31
Cleavage Site	31	32
Non-Cytoplasmic	32	347	0.99