YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|6752401
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKKKMILTS LASVAILGAG FVASQPTFVR AEDAPVANQS QAEKDYDAAM KKSEADKKEY  60
   61 EDVKKVLGEA EAAQKKYEDD QKKTEEKAEK ANAASEEIAK ANRGSFKKAV LDNITVIRNS 120
  121 QRKWEKSRRE AEKKAKERET AARKKFDTIQ TTIVVLEPDE LAKTQKKAEE AAKNKPELTK 180
  181 KLEEAKVKLE EAEKKATEAK QKLDAEEVAL QAKIAELEYE VQRLEKELEE INESDSEDYA 240
  241 KEGFRAPLQS KLDAKKAKLL KLEELSGKIE ELDAEIAELE VQLKDAEGNN NVEAYFKEGL 300
  301 EKTTAEKKAE LEKAEADLKK AVDEPETPAP APAPAPAPAP APAPAPAPAP APKPAPAPKP 360
  361 APAPAPAPAP KPAPAPKPAP APAPAPKPEK PAEKPAPAPK PETPKTYG

Type	Start	End	Confidence
Signal Peptide	1	31	0.91
N-region	1	22
H-region	23	28
C-region	29	31
Cleavage Site	31	32
Non-Cytoplasmic	32	408	0.99