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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|47077078
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METRGLADSG QGSFTGQGIA RFGRIQKKSQ PEKVVRAASR GRPLIGWTQW CAEDGGDESE  60
   61 MALAGSPGCS SGPQGRLSRL IFLLRRWAAR HVHHQDQGPD SFPDRFRGAE LKEVSSQESN 120
  121 AQANVGSQEP ADRGRSAWPL AKCNTNTSNN TEEEKKTKKK DAIVVDPSSN LYYRWLTAIA 180
  181 LPVFHNWYLL ICRACFDELQ SEYLMLWLVL DYSADVLYVL DVLVRARTGF LEQGLMVSDT 240
  241 NRLWQHYKTT TQFKLDVLSL VPTDLAYLKV GTNYPEVRFN RLLKFSRLFE FFDRTETRTN 300
  301 YPNMFRIGNL VLYILIIIHW NACIYFAISK FIGFGTDSWV YPNISIPEHG RLSRKYIYSL 360
  361 YWSTLTLTTI GETPPPVKDE EYLFVVVDFL VGVLIFATIV GNVGSMISNM NASRAEFQAK 420
  421 IDSIKQYMQF RKVTKDLETR VIRWFDYLWA NKKTVDEKEV LKSLPDKLKA EIAINVHLDT 480
  481 LKKVRIFQDC EAGLLVELVL KLRPTVFSPG DYICKKGDIG KEMYIINEGK LAVVADDGVT 540
  541 QFVVLSDGSY FGEISILNIK GSKSGNRRTA NIRSIGYSDL FCLSKDDLME ALTEYPEAKK 600
  601 ALEEKGRQIL MKDNLIDEEL ARAGADPKDL EEKVEQLGSS LDTLQTRFAR LLAEYNATQM 660
  661 KMKQRLSQLE SQVKGGGDKP LADGEVPGDA TKTEDKQQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle