YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GDL11_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTTLLMASL IVSFLLILYY TTIVVASSES RCRRYKSIIS FGDSIADTGN YVHLSNVNNL  60
   61 PQAAFLPYGE SFFHPPSGRY SDGRLVIDFI AEFLGLPYVP PYFGSQNVSF NQGINFAVYG 120
  121 ATALDRAFLV KQGIKSDFTN ISLSVQLNTF KQILPNLCAS STRDCREMLG DSLILMGEIG 180
  181 GNDYNYPFFE GKSINEIKEL VPLIIKAISS AIVDLIDLGG KTFLVPGNFP IGCSTAYLTL 240
  241 FQTATVEHDP FTGCIPWLNK FGEHHNEQLK IELKQLQKLY PHVNIIYADY YNSLYGLFQE 300
  301 PAKYGFKNRP LAACCGVGGQ YNFTIGKECG ENGVSYCQNP SEYVNWDGYH LTEATYQKMA 360
  361 QGLLNGRYTT PAFDWSCLGS YDFSG

Type	Start	End	Confidence
Signal Peptide	1	26	0.96
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	385	0.98