YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GDL91_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSLEKLIS SFLLVLYSTT IIVASSESRC RRFKSIISFG DSIADTGNYL HLSDVNHLPQ  60
   61 SAFLPYGESF FHPPSGRYSD GRLIIDFIAE FLGLPYVPSY FGSQNVSFDQ GINFAVYGAT 120
  121 ALDRVFLVGK GIESDFTNVS LSVQLNIFKQ ILPNLCTSSS RDCREMLGDS LILMGEIGVN 180
  181 DYNYPFFEGK SINEIKQLVP LVIKAISSAI VDLIDLGGKT FLVPGNFPLG CYPAYLTLFQ 240
  241 TAAEEDHDPF TGCIPRLNEF GEYHNEQLKT ELKRLQELYD HVNIIYADYY NSLFRLYQEP 300
  301 VKYGFKNRPL AACCGVGGQY NFTIGKECGH RGVSCCQNPS EYVNWDGYHL TEATHQKMAQ 360
  361 VILNGTYASP AFDWSCSGSE SVDKEYSFSS

Type	Start	End	Confidence
Signal Peptide	1	26	0.95
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	390	0.99