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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|47077339
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPGTLLLLL LGTLKLTVTR AGSHSLRYFG TALSRPGHGE PRFIAVGYVD DTQFVGFDSD  60
   61 AASPRMEPRA PWVEQEGPEY WDRETRRAMD KAQTFQVNLR ILLGYYNQSE AGSHTIQGMI 120
  121 GCDVGPDRSF LRGYLHFAYD GKDYISMNED LHSWSAADTA AQITKRKFKA ANVAKQSRAY 180
  181 LKGECVEWLC RHLENGKETL QRADPPKAHV THHPLSDHEA TLRCWALGFY PAEITLTWQR 240
  241 DGEDQTQDTQ LVETRPAGDG TFQKWAAVVV PSGEEQRYTC HVQHEGLPEP LTLRWEPSSQ 300
  301 PTIPIVGIIA GLVVPGAVVS GAVVTAVMWR RNSSGGKGGS YSQAACGDSA QGSDVSLTAC 360
  361 KA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle