YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TO202_ARATH
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEFSTADFER LIMFEHARKN SEAQYKNDPL DSENLLKWGG ALLELSQFQP IPEAKLMLND  60
   61 AISKLEEALT INPGKHQALW CIANAYTAHA FYVHDPEEAK EHFDKATEYF QRAENEDPGN 120
  121 DTYRKSLDSS LKAPELHMQF MNQGMGQQIL GGGGGGGGGG MASSNVSQSS KKKKRNTEFT 180
  181 YDVCGWIILA CGIVAWVGMA KSLGPPPPAR

Type	Start	End	Confidence
Cytoplasmic	1	178	0.60
Transmembrane Helix	179	200	0.90
Non-Cytoplasmic	201	210	0.87