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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: B3GTH_ARATH
Protein type: Transmembrane
Type Confidence: 0.89
Topology Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKSKLDNSS SQIRFGLVQF LLVVLLFYFL CMSFEIPFIF RTGSGSGSDD VSSSSFADAL  60
   61 PRPMVVGGGS REANWVVGEE EEADPHRHFK DPGRVQLRLP ERKMREFKSV SEIFVNESFF 120
  121 DNGGFSDEFS IFHKTAKHAI SMGRKMWDGL DSGLIKPDKA PVKTRIEKCP DMVSVSESEF 180
  181 VNRSRILVLP CGLTLGSHIT VVATPHWAHV EKDGDKTAMV SQFMMELQGL KAVDGEDPPR 240
  241 ILHFNPRIKG DWSGRPVIEQ NTCYRMQWGS GLRCDGRESS DDEEYVDGEV KCERWKRDDD 300
  301 DGGNNGDDFD ESKKTWWLNR LMGRRKKMIT HDWDYPFAEG KLFVLTLRAG MEGYHISVNG 360
  361 RHITSFPYRT GFVLEDATGL AVKGNIDVHS VYAASLPSTN PSFAPQKHLE MQRIWKAPSL 420
  421 PQKPVELFIG ILSAGNHFAE RMAVRKSWMQ QKLVRSSKVV ARFFVALHAR KEVNVDLKKE 480
  481 AEYFGDIVIV PYMDHYDLVV LKTVAICEYG VNTVAAKYVM KCDDDTFVRV DAVIQEAEKV 540
  541 KGRESLYIGN INFNHKPLRT GKWAVTFEEW PEEYYPPYAN GPGYILSYDV AKFIVDDFEQ 600
  601 KRLRLFKMED VSMGMWVEKF NETRPVAVVH SLKFCQFGCI EDYFTAHYQS PRQMICMWDK 660
  661 LQRLGKPQCC NMR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle