YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|42571373, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLLPFMVNT YFSFVPMQTK NNTPAAQGKC ITRLLLYHFS VNLPLMLASY PVFRAMGMRS  60
   61 SFPLPSWKEV SAQILFYFII EDFVFYWGHR ILHSKWLYKN VHSVHHEYAT PFGLTSEYAH 120
  121 PAEILFLGFA TIVGPALTGP HLITLWLWMV LRVLETVEAH CGYHFPWSLS NFLPLYGGAD 180
  181 FHDYHHRLLY TKSGNYSSTF VYMDWIFGTD KGYRRLKTLK ENGDMKQT

Type	Start	End	Confidence
Cytoplasmic	1	33	0.77
Transmembrane Helix	34	53	0.82
Non-Cytoplasmic	54	123	0.50
Transmembrane Helix	124	148	0.81
Cytoplasmic	149	228	0.62