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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|15222380
Protein type: Transmembrane
Type Confidence: 0.57
Topology Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELSLVRLWN TCFPSFFYIS TVLFLLTGGG VYSHSEYLIG LGSYDITGPA ADVNMMGYAN  60
   61 MEQVASGIHF RLRARTFIVS EPQGKRVVFV NLDACMASQI VKLKVIERLK ARYGDLYTEQ 120
  121 NVGISGIHTH AGPGGYLQYV VYIVTSLGFV RQSFDALVDG IENSIIQAHE NLRPGSIFLN 180
  181 NGELLDAGVN RSPSAYLNNP SKERSKHKYN VDKEMTLLKF VDDQWGPVGS FNWFATHGTS 240
  241 MSRTNSLISG DNKGAASRFM EDWYEQNTAE RSYSEEFISD EIPRRVSSLI ENHQDSHHEL 300
  301 LELASYFESQ PGKPVTRISS SARRVRSALR KADKPGFVSA FCQTNCGDVS PNVLGAFCLD 360
  361 TGLPCDFNHS TCGGKNEMCY GRGPGYPDEF ESTRIIGERQ FKMALELFNK ASEQLQGKVD 420
  421 YRHVYVDFSQ LNVTLPKKDG KSEVVKTCPA AMGFAFAAGT TDGPGAFDFT QGDDKGNPFW 480
  481 RLVRNVLKTP DKKQIDCHYP KPILLDTGEM TKPYDWAPSI LSLQVLRIGQ LFILSVPGEF 540
  541 TTMAGRRLRY AVKTQLKNSG NKDLSGEIHV VIAGLANGYS QYVTTFEEYQ VQRYEGASTL 600
  601 YGPHTLSGYI QEFKKLSKSL VLDMPVQPGP QPPDLLDKQL SFLTPVMMDT TPSGDSFGDV 660
  661 ISDVPKNLSL KRGNGQVTVV FRSACPRNDL LTEGTFTLVE RLEQKDKTWT PVYDDDDLCL 720
  721 RFKWSRHKKL SSRSQATVEW RIPESASPGV YRITHFGAAK KLFGSVHHFT GSSSAFVVT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle