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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|15221680
Protein type: Transmembrane
Type Confidence: 0.70
Topology Confidence: 0.37
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAMLMQPWP PFLPHLTLVF LTLILFFPNQ SFSQSDSPRN IETFFPNDTI TPPVQSPVLS  60
   61 PPQNPSSSSS DSDRGNILRA VLITAASTLL VAAVFFFLVH KCRRRRNRVG GVDNTLQPPV 120
  121 PPLAEAALAR EGFTRFGGNV KGLILDENGL DVLYWRKLQQ SQRDNKGGSF RKEIIHGDDE 180
  181 EKNVIYSKSK KKSGPVTETP LLRGRSSTSH SVIHNDNYRN ATTTHPPHVK TDSFEFVKPD 240
  241 PTPPPPPPPP IPVKQSATPP PPPPPKLKNN GPSPPPPPPL KKTAALSSSA SKKPPPAPRG 300
  301 SSSGESSNGQ VKLKPLHWDK VNPDSDHSMV WDKIDRGSFS FDGDLMEALF GYVAVGKKSP 360
  361 DDGGDKKPSS ASPAQIFILD PRKSQNTAIV LKSLGMTRDE LVESLMEGHD FHPDTLERLS 420
  421 RIAPTKEEQS AILQFDGDTK MLADAESFLF HLLKAVPCAF TRLNALLFRA NYYPEISNHN 480
  481 KNLQTLDLAC TELRSRGLFS VDGKTTLLNF VVEEVVRSEG KRCVLNRRTN RSFSRSSSSS 540
  541 ISEVISKEEQ EKEYLRLGLP VVGGLSSEFT NVKKAAAVDY DTVAATCLAL TSRAKDARRV 600
  601 LAQSEGDNKE GVRFVKKMNE FLDSVEEEVK LAKEEEKKVL ELVKRTTEYY QAGAVKGKNP 660
  661 LHLFVIVRDF LAMVDKVCVE IARNLQRRSS MGSTQQRNAV KFPVLPPNFM SDRSRSDSGG 720
  721 SDSDM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle