YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: 4CLL2_ARATH
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVKHGVDGD GSEIESRTLA VDRKSGFCES TSIFYSKREP MALPPNQFLD VTSFIASQPH  60
   61 RGKTVFVDAV TGRRLSFPEL WLGVERVAGC LYALGVRKGN VVIILSPNSI LFPIVSLSVM 120
  121 SLGAIITTAN PINTSDEISK QIGDSRPVLA FTTCKLVSKL AAASNFNLPV VLMDDYHVPS 180
  181 QSYGDRVKLV GRLETMIETE PSESRVKQRV NQDDTAALLY SSGTTGTSKG VMLSHRNLIA 240
  241 LVQAYRARFG LEQRTICTIP MCHIFGFGGF ATGLIALGWT IVVLPKFDMA KLLSAVETHR 300
  301 SSYLSLVPPI VVAMVNGANE INSKYDLSSL HTVVAGGAPL SREVTEKFVE NYPKVKILQG 360
  361 YGLTESTAIA ASMFNKEETK RYGASGLLAP NVEGKIVDPD TGRVLGVNQT GELWIRSPTV 420
  421 MKGYFKNKEA TASTIDSEGW LKTGDLCYID GDGFVFVVDR LKELIKCNGY QVAPAELEAL 480
  481 LLAHPEIADA AVIPIPDMKA GQYPMAYIVR KVGSNLSESE IMGFVAKQVS PYKKIRKVTF 540
  541 LASIPKNPSG KILRRELTKL TTSKL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle