YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|42562146
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPTIEEIRAQ EVWNNCAVRA VTSGVMGGGL GLMMGLFLGA LDNPITHDTM TARSWNSCKT  60
   61 FAVMGLVFSA AECIVEKARA KHDTVNTAIA GCVTGGSMSA RGGPKAACIG CAGFAIFSVL 120
  121 IEKFFDRHT

Type	Start	End	Confidence
Cytoplasmic	1	17	0.90
Transmembrane Helix	18	41	0.88
Non-Cytoplasmic	42	102	0.75
Transmembrane Helix	103	125	0.78
Cytoplasmic	126	129	0.77