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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: UBP15_ARATH
Protein type: Transmembrane
Type Confidence: 0.76
Topology Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLEPRGADIP ILFLVLVVLP VVAYILLGKW SNISEKRVRA NLLAQMAAEE ALRAETVVNA  60
   61 DRGVRFESVA TENRAQRTRT KTVSAGGGAV RAEFDAGARE TVAEQRSDSV TATCGVTVVA 120
  121 PVNNNELHVC ARCFGPAKTR CSRCKSVRYC SGKCQIIHWR VAHKDECVPV ESCSSSSERV 180
  181 SFEKDSVLYD HGMDSTMYSN NTTQAAKGKT SKSSVDFASL GISQNDITPQ INTQGRKSVG 240
  241 KQHSSKANRE SCRRDSATVF DSSDEAASAG GDNKTSHIKH KSRGNSYAAE TNPRRHSVDS 300
  301 SAVQMNGQSF VSGMQESHKH ENNLGVRSSF GCPNTQYPSN GTRTATLPRT GINKSGEQSC 360
  361 TETSKKGQVA AVSKTVRSKD TGISEESNGI SSTMGIMKMM GLRNSTKHDD RYKNLKMLFP 420
  421 YEEFLKFFQC EVFDLSPRGL VNCGNSCYAN AVLQSLTCTK PLVAYLLRRS HSRSCSGKDW 480
  481 CLMCELEQHV MMLRESGGPL SASRILSHMR SINCQIGDGS QEDAHEFLRL LVASMQSICL 540
  541 ERLGGETKVD PRLQETTLVQ HMFGGRLRSK VKCLRCDHES ERYENIMDLT LEIYGWVESL 600
  601 QDALTQFTRP EDLDGENMYR CSRCAGYVRA RKELSIHEAP NILTIVLKRF QEGRYGKINK 660
  661 CISFPEMLDM IPFMTRTGDV PPLYMLYAVI VHLDTLNASF SGHYISYVKD LRGNWYRIDD 720
  721 SEIHPVPMTQ VMSEGAYMLF YMRSYPRPQR GEHNGKAPVH HSQPRNEMKE QRKPVNRFKP 780
  781 RADHKNTESS SSEWSLFTSS DEASFTTEST RDSFSTIDYT DVCHVVDSSS PFAIFNNVYH 840
  841 NVEPSPHNTV ACRMFSGTKP ETRYFVEQET NHNNTVVLDA TPSLYPIPAP YPPHDYYDQS 900
  901 MYVNYETNPE FNNGQDQDRT YSYW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle