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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|15219949
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEQFRFLNNG DFGESTVEYG ASYRDLGVIR NQFRLCFFNT TPNAFTLAIG MGTGSSDSII  60
   61 RWVWQANPQK PVQEEASLSF GPEGNLVLAQ PDGRVVWQTM TENKGVIGLT MNENGNLVLF 120
  121 DDGGWPVWQS FEFPTDTLLV GQSLTLDGSK NKLVSRNNGS YSLILEPDRL VLNRLIPRSN 180
  181 NKSLVYHIIE GRFIPSATLY SAKDQGTTTQ LGLATPGLRP EFPYKHFLAR PRFNASQSFL 240
  241 RLDADGNLRI YSFDSKVTFL AWEVTFELFN HDNNNECWLP SKCGAFGICE DNQCVACPLG 300
  301 VGLMGWSKAC KPKKVKSCDP KSFHYYRLGG VEHFMTKYNV GLALGESNSM DLTTTRQRRP 360
  361 LISDSSSSSS TKSYSKTDKP GRSNGGDAED GGLRWFLPFI ALCYLRYMSA TSNIIHDCDE 420
  421 VFNYWEPLHY ILYKSGFQTW EYSSNFALRS YLYILFHELA GRPASWWFGD DKVRVFYAVR 480
  481 LFLGLVSAVS DTVLVVALSR KYGKRIATYA VAMLCLTSGC FFASTSFLPS SFSMYAISLS 540
  541 SGLLLFEKYA MAVAVSVVGV ILGWPFSILA FLPVVIYSLV KRFKQAFIAG AVTTIFLLGV 600
  601 SLLVDYYYYK RWTSSVLNLL IYNVLGGGES HLYGTEGALF YIRNGFNNFN FCFILAMLFV 660
  661 AIYPVIRRKY DRALLVVISP MYIWLAFMSL QPHKEERFLY PIYPLICVSA SAVIENIPEL 720
  721 FREKYSSRES LLVTITKYMR PVILGCILCA SHSRTFALIN GYSAPLEVYK LLEHHDDAGP 780
  781 GSVLCVGSEW HRYPSSFFVP HYISEVRWID DGFRGLLPFP FNNTLGGTSA SPPYFNNKNQ 840
  841 ASEEQYLKNI ETCTFLIELQ LSRPYQYRGS DLSTWEAIAV LPYLDRELSP AKYRSFFIPH 900
  901 MWQEKNVFGK YVALRRVPK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle