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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|6714532, gi|2...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVFQDFDQLS ERRRLERQQK LRKKIIIASV SSIAFFVIVG AGVFSLVSNH DISSPGNNGG  60
   61 SPSAATRPAE KAKPISHVAR VIKTVCNATT YQDTCQNTLE KGVLGKDPSS VQPKDLLKIA 120
  121 IKAADEEIDK VIKKASSFKF DKPREKAAFD DCLELIEDAK EELKNSVDCI GNDIGKLASN 180
  181 APDLSNWLSA VMSYQQTCID GFPEGKLKSD MEKTFKATRE LTSNSLAMVS SLVSFLKNFS 240
  241 FSGTLNRRLL AEEQNSPSLD KDGVPGWMSH EDRRILKGAD KDKPKPNVSV AKDGSGDFKT 300
  301 ISEALAAMPA KYEGRYVIFV KQGVYDETVT VTKKMANITM YGDGSQKTIV TGNKNFADGV 360
  361 QTFRTATFAV LGDGFLCKFM GFRNTAGPEK HQAVAIRVQA DRAIFLNCRF EGYQDTLYAQ 420
  421 THRQFYRSCV ITGTVDFIFG DATSVFQNCL ITVRKPLENQ QNIVTAQGRI DGHETTGIVL 480
  481 QSCRIEPDKD LVPVKNKIRS YLGRPWKEFS RTVIMDSTIG DFIHPGGWLP WQGDFGLKTL 540
  541 YYAEYSNKGG GAQTNARIKW PGYHIIKKEE AMKFTIENFY QGDWISASGS PVHLGL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle