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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SBT3B_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMSSIVSWWF FWVISAVCIL KVEFNIVEGG AYEETKVHIV YLGEKEHNDP ELVTSSHLRM  60
   61 LESLLGSKKD ASESIVHSYR NGFSGFAAHL TDSQAEQISE HPDVVQVTPN TFYELQTTRT 120
  121 FDYLGLSHST PKGLLHEAKM GEDIIIGVLD SGVWPESQSF NDKGLGPIPK RWKGMCVDGE 180
  181 DFDSKKHCNK KLIGARYYMD SLFRRNKTDS GIPDTEYMSA RESLPHGTHV ASTAGGSFVS 240
  241 NVSDNGFGVG TIRGGAPRAR IAVYKVCWQR VDRTCASADI IKAMDDAIAD GVDLITISIG 300
  301 RPNPVLTEVD VYNQISYGAF HAVAKGIPVL SAGGNFGPGA YTVQNIAPWI ITVAATTLDR 360
  361 WYPTPLTLGN NVTLMARTPY KGNEIQGDLM FVYSPDEMTS AAKGKVVLTF TTGSEESQAG 420
  421 YVTKLFQVEA KSVIIAAKRN DVIKVSEGLP IIMVDYEHGS TIWKYLSITR MPTIKISSAI 480
  481 ALNGRLVATK VADFSGRGPN SISPYVLKPD VAAPGVAIVA ASTPESMGTE EGFAIQSGTS 540
  541 MSTPVVAGLV ALLRAVHPDW SPAALKSALI TTASTTDPYG EPIFSEGMTR KLADPFDFGG 600
  601 GLVNPNKAAD PGLVYDISAE DYRLFLCASH YDEKQITKIS KTHTPYRCPS PKPSMLDLNL 660
  661 PSITIPFLKE DVTLTRTVTN VGPVDSVYKL IVEPPLGVKI SVTPNTLLFN SNVKILSYKV 720
  721 TVSTTHKSNS IYYFGSLTWT DGSHKVTIPL SVRTQMLMYF DQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle