YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|25313138
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTARFNQQIL KQRHFSESTR LVKKRKRRSR RKVCLLCLCW SVFEEMVKST SKDAQDLFHS  60
   61 LHSAYTATPT NLKIIDLYVC FAVFTALIQV AYMALVGSFP FNSFLSGVLS CIGTAVLAVC 120
  121 LRIQVNKENK EFKDLAPERA FADFVLCNLV LHLVIINFLG

Type	Start	End	Confidence
Cytoplasmic	1	73	0.96
Transmembrane Helix	74	96	0.87
Non-Cytoplasmic	97	102	0.81
Transmembrane Helix	103	123	0.92
Cytoplasmic	124	139	0.86
Transmembrane Helix	140	159	0.79
Non-Cytoplasmic	160	160	0.86