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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: B3GTJ_ARATH
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKPKLSKLE RLEKFDIFVS LSKQRSVQIL MAVGLLYMLL ITFEIPFVFK TGLSSLSQDP  60
   61 LTRPEKHNSQ RELQERRAPT RPLKSLLYQE SQSESPAQGL RRRTRILSSL RFDPETFNPS 120
  121 SKDGSVELHK SAKVAWEVGR KIWEELESGK TLKALEKEKK KKIEEHGTNS CSLSVSLTGS 180
  181 DLLKRGNIME LPCGLTLGSH ITVVGKPRAA HSEKDPKISM LKEGDEAVKV SQFKLELQGL 240
  241 KAVEGEEPPR ILHLNPRLKG DWSGKPVIEQ NTCYRMQWGS AQRCEGWRSR DDEETVDGQV 300
  301 KCEKWARDDS ITSKEEESSK AASWWLSRLI GRSKKVTVEW PFPFTVDKLF VLTLSAGLEG 360
  361 YHVSVDGKHV TSFPYRTGFT LEDATGLTIN GDIDVHSVFA GSLPTSHPSF SPQRHLELSS 420
  421 NWQAPSLPDE QVDMFIGILS AGNHFAERMA VRRSWMQHKL VKSSKVVARF FVALHSRKEV 480
  481 NVELKKEAEF FGDIVIVPYM DSYDLVVLKT VAICEYGAHQ LAAKFIMKCD DDTFVQVDAV 540
  541 LSEAKKTPTD RSLYIGNINY YHKPLRQGKW SVTYEEWPEE DYPPYANGPG YILSNDISRF 600
  601 IVKEFEKHKL RMFKMEDVSV GMWVEQFNNG TKPVDYIHSL RFCQFGCIEN YLTAHYQSPR 660
  661 QMICLWDKLV LTGKPQCCNM R

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle