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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ERL1_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.97
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKEKMQRMVL SLAMVGFMVF GVASAMNNEG KALMAIKGSF SNLVNMLLDW DDVHNSDLCS  60
   61 WRGVFCDNVS YSVVSLNLSS LNLGGEISPA IGDLRNLQSI DLQGNKLAGQ IPDEIGNCAS 120
  121 LVYLDLSENL LYGDIPFSIS KLKQLETLNL KNNQLTGPVP ATLTQIPNLK RLDLAGNHLT 180
  181 GEISRLLYWN EVLQYLGLRG NMLTGTLSSD MCQLTGLWYF DVRGNNLTGT IPESIGNCTS 240
  241 FQILDISYNQ ITGEIPYNIG FLQVATLSLQ GNRLTGRIPE VIGLMQALAV LDLSDNELVG 300
  301 PIPPILGNLS FTGKLYLHGN MLTGPIPSEL GNMSRLSYLQ LNDNKLVGTI PPELGKLEQL 360
  361 FELNLANNRL VGPIPSNISS CAALNQFNVH GNLLSGSIPL AFRNLGSLTY LNLSSNNFKG 420
  421 KIPVELGHII NLDKLDLSGN NFSGSIPLTL GDLEHLLILN LSRNHLSGQL PAEFGNLRSI 480
  481 QMIDVSFNLL SGVIPTELGQ LQNLNSLILN NNKLHGKIPD QLTNCFTLVN LNVSFNNLSG 540
  541 IVPPMKNFSR FAPASFVGNP YLCGNWVGSI CGPLPKSRVF SRGALICIVL GVITLLCMIF 600
  601 LAVYKSMQQK KILQGSSKQA EGLTKLVILH MDMAIHTFDD IMRVTENLNE KFIIGYGASS 660
  661 TVYKCALKSS RPIAIKRLYN QYPHNLREFE TELETIGSIR HRNIVSLHGY ALSPTGNLLF 720
  721 YDYMENGSLW DLLHGSLKKV KLDWETRLKI AVGAAQGLAY LHHDCTPRII HRDIKSSNIL 780
  781 LDENFEAHLS DFGIAKSIPA SKTHASTYVL GTIGYIDPEY ARTSRINEKS DIYSFGIVLL 840
  841 ELLTGKKAVD NEANLHQLIL SKADDNTVME AVDPEVTVTC MDLGHIRKTF QLALLCTKRN 900
  901 PLERPTMLEV SRVLLSLVPS LQVAKKLPSL DHSTKKLQQE NEVRNPDAEA SQWFVQFREV 960
  961 ISKSSI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle