YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|15240298
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHFFGTKDKA PIYAGIAVVS FMILTGLTFA GTAVALTVMI PVLVVLSPIL VPAVITSSFL  60
   61 ATGFLASGSL GALGIALLIW LYKKEEYSRA TLHARGGRPD GPNKLAESGK QSGGDNPLKE 120
  121 DKPPERDKLP RKDKPSKEDN LLKGDKPVEE DKLPAEEEKP PQKDKPAEGH KPPQKDKPAE 180
  181 GDKPVEEDKP PQKDKPAEGD KHVEEDMPLG GVEHLSIPEI PKVLY

Type	Start	End	Confidence
Cytoplasmic	1	11	0.88
Transmembrane Helix	12	43	0.79
Non-Cytoplasmic	44	58	0.67
Transmembrane Helix	59	82	0.91
Cytoplasmic	83	225	0.95