YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|40645512
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARPGAWSVL VVLAVASCVS HAQEASDRER RAPSGFLGMR GKKDAAAPLN EVDEASANDY  60
   61 PILPDPIAAR LYAFRNGNAP VGLAVPLRGK KAPSGFLGMR GKKSDEEIFG DASDDSDLET 120
  121 LLKRAPSGFL GMRGKKAPSG FLGMRGKKAP SGFLGMRGKK YYDDDGEMDA LIQAFTAMMD 180
  181 GQQQKRAPSG FLGMRGKKAI YGDDSDEELN MAGVDKRAPS GFLGMRG

Type	Start	End	Confidence
Signal Peptide	1	22	0.99
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	227	0.99