YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|1813565
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNALLILAPI FVGLVVASYD PYVDMAQLYR MQLLANAFDD YMPEGQALDS RGQDEEPFWP  60
   61 DLSGEDAKAA VYNDPLYSGA HARDQEHLEH SDLHGFQSVS GGTAEGAPNA KQVKSDKQLP 120
  121 AYCNPPNPCP VGKTAEKDNC VENFVNSADN NQKLLSQQDC PCDTEHMFTC PAGSQTVSSK 180
  181 GTSGSQQMAL NKVIDELSKM EHNGESLENN PNLSSSRKRL TLVAKKSPHA IKKRSEMSDH 240
  241 GNPFLQGEQM DIAAKKDPLL AKNAMHNWRL NHH

Type	Start	End	Confidence
Signal Peptide	1	17	0.98
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	273	0.99