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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|16040952
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.88
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRGVLFSVLL LFPAFSFSAN TLSATESLTI SSNKTISSPG NIFELGFFKP SSSSRWYLGI  60
   61 WYKAISKRTY VWVANRDHPL STSTGTLKIS DSNLVVVDGS DTAVWSTNLT GGGDVRSPVV 120
  121 AELLDNGNLV LRDSNNNDPD GVLWQSFDFP TDTLLPEMKL GWDLKTGFNR FLRSWKSPDD 180
  181 PSSGDYSFKL ETRGFPEAFL WNKASQVYRS GPWNGIRFSG VPEMQPFDYI EFNFTTSNQE 240
  241 VTYSFHITKD NMYSRLSLSS TGSLQRFTWI EAIQNWNQFW YAPKDQCDEY KECGTFGYCD 300
  301 SNTYPVCNCM RGFEPRNPQA WALRDGSDGC VRKTALSCNG GDGFVRLKKM KLPDTAATSV 360
  361 DRGIGIKECE EKCKSDCNCT AFANTDIRGG GSGCVVWTGD ILDTRNYAKG GQDLYVRLAA 420
  421 TDLEDTTNRN AKIIGSCIGV SVLLLLCFIF YRFWKRKQKR SIAIETSFVR SQDLLMNEVV 480
  481 IPSRRHISRE NKTDDFELPL MDFEAVAIAT DNFTNANKLG QGGFGIVYKG RLLDGQEIAV 540
  541 KRLSKMSVQG TDEFKNEVKL IARLQHINLV RLLGCCVDEG EKMLIYEYLE NLSLDSHLFD 600
  601 KTRSCKLNWQ KRFDITNGIA RGLLYLHQDS RFRIIHRDLK ASNVLLDKDM TPKISDFGMA 660
  661 RIFGRDETEA NTRKVVGTYG YMSPEYAMDG IFSTKSDVFS FGVLLLEIIS GKRNKGFYNS 720
  721 DHDLNLLGCV WRNWKKGKGL DIVDPIILDS SPSTYRPLEI LRCIKIGLLC VQERANDRPT 780
  781 MSSVVMMLGS ETTAIPQPEP PGYCVGRSPL DTDSSSSNQR NDESWSVNQM TVSVIDPR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle