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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Y5457_ARATH
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEISLMKFLF LGIWVYYYSV LDSVSAMDSL LSPKGVNYEV AALMSVKNKM KDEKEVLSGW  60
   61 DINSVDPCTW NMVGCSSEGF VVSLEMASKG LSGILSTSIG ELTHLHTLLL QNNQLTGPIP 120
  121 SELGQLSELE TLDLSGNRFS GEIPASLGFL THLNYLRLSR NLLSGQVPHL VAGLSGLSFL 180
  181 DLSFNNLSGP TPNISAKDYR IVGNAFLCGP ASQELCSDAT PVRNATGLSE KDNSKHHSLV 240
  241 LSFAFGIVVA FIISLMFLFF WVLWHRSRLS RSHVQQDYEF EIGHLKRFSF REIQTATSNF 300
  301 SPKNILGQGG FGMVYKGYLP NGTVVAVKRL KDPIYTGEVQ FQTEVEMIGL AVHRNLLRLF 360
  361 GFCMTPEERM LVYPYMPNGS VADRLRDNYG EKPSLDWNRR ISIALGAARG LVYLHEQCNP 420
  421 KIIHRDVKAA NILLDESFEA IVGDFGLAKL LDQRDSHVTT AVRGTIGHIA PEYLSTGQSS 480
  481 EKTDVFGFGV LILELITGHK MIDQGNGQVR KGMILSWVRT LKAEKRFAEM VDRDLKGEFD 540
  541 DLVLEEVVEL ALLCTQPHPN LRPRMSQVLK VLEGLVEQCE GGYEARAPSV SRNYSNGHEE 600
  601 QSFIIEAIEL SGPR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle