YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|110743871, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDEQVQEPLS DQVFINFRGD ELREIFVNHL ELQLRNAGIN VFIDTKEQKG RRLQYLFTRI  60
   61 KKSKIALAIF SKRYCESKWC LDELVTMNEQ MKEKKLVVIP IFYNVRSDDV KRAANPDGEG 120
  121 NLDGEFSLPF KQLKQNHAGE PERVEGWERA LRSVTKRIGF SRSNSKYKHD TDFVLDIVKE 180
  181 VKKQLNIPTD NSWSAIGVAF LAITINLIFS FFIAPKYLPD QKFFQTPEWF IGTLAVVLAS 240
  241 WFWYKNNQNK APPPS

Type	Start	End	Confidence
Cytoplasmic	1	191	0.75
Transmembrane Helix	192	214	0.91
Non-Cytoplasmic	215	225	0.63
Transmembrane Helix	226	244	0.92
Cytoplasmic	245	255	0.70