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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: AB27B_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.37
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNKKLLTGG SSKTHGSGSS YRDPLLQNQE DKPKANGSEN GLNDLEHGVV EAANVGFGRV  60
   61 FALAKPDAGK LVIGTIALLI GSTTNLLVPK FGGMIIDIVS RDVKTPEQQT ESLIAVRNAV 120
  121 VIILLIVVIG SICTALRAWL FNSASERVVA RLRKDLFRHL MHQEIAFYDV TKTGELLSRL 180
  181 SEDTQIIKNA ATTNLSEALR NVTTALIGVG FMFTSSWKLT LLALVVVPVI SVAVKQFGRY 240
  241 LRELSHTTQA AAAVAASIAE ESFGAVRTVR SFAKESYMVS QYSKKVDETL KLGLKQAVLV 300
  301 GLFFGGLNAA FTLSVITVVS YGAYLTIYGS MTVGALTSFI LYSLTVGSSV SSLSSLYTTA 360
  361 MKAAGASRRV FQILDRVSSM SSSGDKCPVG NPDGDVELND VWFAYPSRPS HMILKGISLR 420
  421 LTPGSKVALV GPSGGGKTTI ANLIERFYDP LKGKILLNGV SLMEISHQYL HKQISIVSQE 480
  481 PILFNCSVEE NIAYGFDGEA SFTDIENAAK MANAHEFIEA FPDKYNTVVG ERGLRLSGGQ 540
  541 KQRIAIARAL LTNPSVLLLD EATSALDAES EYLVQDAMDS LMAGRTVLVI AHRLSTVKTA 600
  601 DCVAVISDGE VAEKGTHDEL LSLNGIYTNL VKRQLQSSSS VTTL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle